To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("rnaSeqMap")

In most cases, you don't need to download the package archive at all.

rnaSeqMap

rnaSeq secondary analyses

Bioconductor version: 3.1

The rnaSeqMap library provides classes and functions to analyze the RNA-sequencing data using the coverage profiles in multiple samples at a time

Author: Anna Lesniewska <alesniewska at cs.put.poznan.pl>; Michal Okoniewski <michal at fgcz.ethz.ch>

Maintainer: Michal Okoniewski <michal at fgcz.ethz.ch>

Citation (from within R, enter citation("rnaSeqMap")):

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("rnaSeqMap")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rnaSeqMap")

PDF	R Script	rnaSeqMap primer
PDF		Reference Manual

biocViews	Annotation, DifferentialExpression, GeneExpression, RNASeq, ReportWriting, SAGE, Sequencing, Software, Transcription, Visualization
Version	2.26.0
In Bioconductor since	BioC 2.7 (R-2.12) (5 years)
License	GPL-2
Depends	R (>= 2.11.0), methods, Biobase, Rsamtools, GenomicAlignments
Imports	GenomicRanges, IRanges, edgeR, DESeq, DBI
LinkingTo
Suggests
SystemRequirements
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URL
Depends On Me	ampliQueso
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	rnaSeqMap_2.26.0.tar.gz
Windows Binary	rnaSeqMap_2.26.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	rnaSeqMap_2.26.0.tgz
Mac OS X 10.9 (Mavericks)	rnaSeqMap_2.26.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/rnaSeqMap/tree/release-3.1
Package Short Url	http://bioconductor.org/packages/rnaSeqMap/
Package Downloads Report	Download Stats

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