To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("plrs")
In most cases, you don't need to download the package archive at all.
plrs
Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and gene expression
Bioconductor version: 3.1
The present package implements a flexible framework for modeling the relationship between DNA copy number and gene expression data using Piecewise Linear Regression Splines (PLRS).
Author: Gwenael G.R. Leday
Maintainer: Gwenael G.R. Leday to <gleday at few.vu.nl>
Citation (from within R,
enter citation("plrs")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("plrs")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("plrs")
| R Script | plrs | |
| Reference Manual |
Details
| biocViews | Regression, Software |
| Version | 1.8.0 |
| In Bioconductor since | BioC 2.12 (R-3.0) (2.5 years) |
| License | GPL (>=2.0) |
| Depends | R (>= 2.10), Biobase |
| Imports | BiocGenerics, CGHbase, graphics, grDevices, ic.infer, marray, methods, quadprog, Rcsdp, stats, stats4, utils |
| LinkingTo | |
| Suggests | mvtnorm, methods |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | plrs_1.8.0.tar.gz |
| Windows Binary | plrs_1.8.0.zip |
| Mac OS X 10.6 (Snow Leopard) | plrs_1.8.0.tgz |
| Mac OS X 10.9 (Mavericks) | plrs_1.8.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/plrs/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/plrs/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
