To install this package, start R and enter:
## try http if https is not available source("https://bioconductor.org/biocLite.R") biocLite("annaffy")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 3.1
Functions for handling data from Bioconductor Affymetrix annotation data packages. Produces compact HTML and text reports including experimental data and URL links to many online databases. Allows searching biological metadata using various criteria.
Author: Colin A. Smith <annaffy at colinsmith.org>
Maintainer: Colin A. Smith <annaffy at colinsmith.org>
Citation (from within R,
enter citation("annaffy")
):
To install this package, start R and enter:
## try http if https is not available source("https://bioconductor.org/biocLite.R") biocLite("annaffy")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("annaffy")
R Script | annaffy Primer | |
Reference Manual |
biocViews | Annotation, GO, Microarray, OneChannel, Pathways, ReportWriting, Software |
Version | 1.40.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 10.5 years) |
License | LGPL |
Depends | R (>= 2.5.0), methods, Biobase, GO.db, KEGG.db |
Imports | AnnotationDbi(>= 0.1.15) |
LinkingTo | |
Suggests | hgu95av2.db, multtest, tcltk |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | a4Base, a4Reporting, PGSEA, webbioc |
Imports Me | |
Suggests Me | AffyExpress, ArrayTools, BiocCaseStudies, oneChannelGUI |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | annaffy_1.40.0.tar.gz |
Windows Binary | annaffy_1.40.0.zip |
Mac OS X 10.6 (Snow Leopard) | annaffy_1.40.0.tgz |
Mac OS X 10.9 (Mavericks) | annaffy_1.40.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/annaffy/tree/release-3.1 |
Package Short Url | http://bioconductor.org/packages/annaffy/ |
Package Downloads Report | Download Stats |
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