To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("STRINGdb")

In most cases, you don't need to download the package archive at all.

STRINGdb

STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

Bioconductor version: 3.1

The STRINGdb package provides a user-friendly interface to the STRING protein-protein interactions database ( http://www.string-db.org ).

Author: Andrea Franceschini <andrea.franceschini at isb-sib.ch>

Maintainer: Andrea Franceschini <andrea.franceschini at isb-sib.ch>

Citation (from within R, enter citation("STRINGdb")):

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("STRINGdb")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("STRINGdb")

PDF	R Script	STRINGdb Vignette
PDF		Reference Manual

biocViews	Network, Software
Version	1.8.1
In Bioconductor since	BioC 2.13 (R-3.0) (2 years)
License	GPL-2
Depends	R (>= 2.14.0), png, sqldf, plyr, igraph, RCurl, plotrix, methods, RColorBrewer, gplots, hash
Imports
LinkingTo
Suggests	RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me	scsR
Imports Me	pwOmics
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	STRINGdb_1.8.1.tar.gz
Windows Binary	STRINGdb_1.8.1.zip
Mac OS X 10.6 (Snow Leopard)	STRINGdb_1.8.1.tgz
Mac OS X 10.9 (Mavericks)	STRINGdb_1.8.1.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/STRINGdb/tree/release-3.1
Package Short Url	http://bioconductor.org/packages/STRINGdb/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: