To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("RchyOptimyx")

In most cases, you don't need to download the package archive at all.

RchyOptimyx

Optimyzed Cellular Hierarchies for Flow Cytometry

Bioconductor version: 3.1

Constructs a hierarchy of cells using flow cytometry for maximization of an external variable (e.g., a clinical outcome or a cytokine response).

Author: Adrin Jalali, Nima Aghaeepour

Maintainer: Adrin Jalali <adrin.jalali at gmail.com>, Nima Aghaeepour <naghaeep at gmail.com>

Citation (from within R, enter citation("RchyOptimyx")):

Installation

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("RchyOptimyx")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RchyOptimyx")

 

PDF R Script flowType package
PDF   Reference Manual
Text   NEWS

Details

biocViews FlowCytometry, Software
Version 2.8.0
In Bioconductor since BioC 2.10 (R-2.15) (3.5 years)
License Artistic-2.0
Depends R (>= 2.10)
Imports Rgraphviz, sfsmisc, graphics, methods, graph, grDevices, flowType(>= 2.0.0)
LinkingTo
Suggests flowCore
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RchyOptimyx_2.8.0.tar.gz
Windows Binary RchyOptimyx_2.8.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RchyOptimyx_2.8.0.tgz
Mac OS X 10.9 (Mavericks) RchyOptimyx_2.8.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/RchyOptimyx/tree/release-3.1
Package Short Url http://bioconductor.org/packages/RchyOptimyx/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center