To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("RTCA")
In most cases, you don't need to download the package archive at all.
RTCA
Open-source toolkit to analyse data from xCELLigence System (RTCA)
Bioconductor version: 3.1
Import, analyze and visualize data from Roche(R) xCELLigence RTCA systems. The package imports real-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system, the Bioconductor package RTCA provides several unique transformation (normalization) strategies and various visualization tools.
Author: Jitao David Zhang
Maintainer: Jitao David Zhang <davidvonpku at gmail.com>
Citation (from within R,
enter citation("RTCA")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("RTCA")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RTCA")
| R Script | Introduction to Data Analysis of the Roche xCELLigence System with RTCA Package | |
| R Script | RTCAtransformation: Discussion of transformation methods of RTCA data | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | CellBasedAssays, Infrastructure, Software, TimeCourse, Visualization |
| Version | 1.20.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (6 years) |
| License | LGPL-3 |
| Depends | methods, stats, graphics, Biobase, RColorBrewer, gtools |
| Imports | |
| LinkingTo | |
| Suggests | xtable |
| SystemRequirements | |
| Enhances | |
| URL | http://code.google.com/p/xcelligence/ http://www.xcelligence.roche.com/ http://www.nextbiomotif.com/Home/scientific-programming |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | RTCA_1.20.0.tar.gz |
| Windows Binary | RTCA_1.20.0.zip |
| Mac OS X 10.6 (Snow Leopard) | RTCA_1.20.0.tgz |
| Mac OS X 10.9 (Mavericks) | RTCA_1.20.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/RTCA/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/RTCA/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
