To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("HELP")
In most cases, you don't need to download the package archive at all.
HELP
Tools for HELP data analysis
Bioconductor version: 3.1
The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications
Author: Reid F. Thompson <rthompso at aecom.yu.edu>, John M. Greally <jgreally at aecom.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>
Maintainer: Reid F. Thompson <rthompso at aecom.yu.edu>
Citation (from within R,
enter citation("HELP")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("HELP")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HELP")
| R Script | 1. Primer | |
| Reference Manual |
Details
| biocViews | CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization |
| Version | 1.26.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (7 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | HELP_1.26.0.tar.gz |
| Windows Binary | HELP_1.26.0.zip |
| Mac OS X 10.6 (Snow Leopard) | HELP_1.26.0.tgz |
| Mac OS X 10.9 (Mavericks) | HELP_1.26.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/HELP/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/HELP/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
