- Home
- Bioconductor 3.1
- Software Packages
- CNORfuzzy
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("CNORfuzzy")
In most cases, you don't need to download the package archive at all.
CNORfuzzy
Addon to CellNOptR: Fuzzy Logic
Bioconductor version: 3.1
This package is an extension to CellNOptR. It contains additional functionality needed to simulate and train a prior knowledge network to experimental data using constrained fuzzy logic (cFL, rather than Boolean logic as is the case in CellNOptR). Additionally, this package will contain functions to use for the compilation of multiple optimization results (either Boolean or cFL).
Author: M. Morris, T. Cokelaer
Maintainer: T. Cokelaer <cokelaer at ebi.ac.uk>
Citation (from within R,
enter citation("CNORfuzzy")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("CNORfuzzy")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CNORfuzzy")
| R Script | Main vignette:Playing with networks using CNORfuzzyl | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Network, Software |
| Version | 1.10.0 |
| In Bioconductor since | BioC 2.11 (R-2.15) (3 years) |
| License | GPL-2 |
| Depends | R (>= 2.15.0), CellNOptR(>= 1.4.0), nloptr (>= 0.8.5) |
| Imports | |
| LinkingTo | |
| Suggests | xtable, Rgraphviz, RUnit, BiocGenerics |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | CNORfuzzy_1.10.0.tar.gz |
| Windows Binary | CNORfuzzy_1.10.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | CNORfuzzy_1.10.0.tgz |
| Mac OS X 10.9 (Mavericks) | CNORfuzzy_1.10.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/CNORfuzzy/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/CNORfuzzy/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
