breast.chr17 |
Breast cancer data set DNA copy number and mRNA expression measure on chromosome 17 |
CNregions |
A function to remove redundant copy number regions |
compute.pod |
A function to compute the proportion of deviation from perfect block diagonal matrix |
coord |
genomic coordinates |
gbm.exp |
GBM data |
gbm.mut |
GBM data |
gbm.seg |
GBM data |
getBIC |
Utility functions for iClusterPlus package |
getClusters |
Utility functions for iClusterPlus package |
getDevR |
Utility functions for iClusterPlus package |
glp |
good lattice points using the uniform design |
iCluster |
Integrative clustering of multiple genomic data types |
iCluster2 |
Integrative clustering of multiple genomic data types |
iClusterPlus |
Integrative clustering of multiple genomic data types |
iManual |
Utility functions for iClusterPlus package |
plotHeatmap |
A function to generate heatmap panels sorted by integrated cluster assignment. |
plotiCluster |
A function to generate cluster separability matrix plot. |
plotRI |
A function to generate reproducibility index plot. |
simuResult |
The results for the analysis of the simulated data. |
tune.iCluster2 |
Integrative clustering of multiple genomic data types |
tune.iClusterPlus |
Integrative clustering of multiple genomic data |
variation.hg18.v10.nov.2010 |
Human genome variants of the NCBI 36 (hg18) assembly |