R Client for Google Genomics API


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Documentation for package ‘GoogleGenomics’ version 1.0.0

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GoogleGenomics-package A basic R package for Google Genomics API.
authenticate Configure how to authenticate for Google Genomics API.
getReads Get reads from Google Genomics.
getReadsPage Get one page of reads from Google Genomics.
getSearchPage Get one page of search results for a particular entity type from Google Genomics.
getVariants Get variants from Google Genomics.
getVariantsPage Get one page of variants from Google Genomics.
GoogleGenomics A basic R package for Google Genomics API.
readsToGAlignments Convert reads to GAlignments.
variantsToGRanges Convert variants to GRanges.
variantsToVRanges Convert variants to VRanges.