To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

In most cases, you don't need to download the package archive at all.

phastCons100way.UCSC.hg19

UCSC phastCons conservation scores

Bioconductor version: 3.0

UCSC phastCons conservation scores from alignments of 100 vertebrate species

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons100way.UCSC.hg19")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, ExperimentData, Genetics, Homo_sapiens, PhastConsDb
Version 1.1.0
License Artistic-2.0
Depends R (>= 3.0.0), VariantFiltering
Imports utils, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me VariantFiltering
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source phastCons100way.UCSC.hg19_1.1.0.tar.gz
Windows Binary phastCons100way.UCSC.hg19_1.1.0.zip
Mac OS X 10.6 (Snow Leopard) phastCons100way.UCSC.hg19_1.1.0.tgz
Mac OS X 10.9 (Mavericks) phastCons100way.UCSC.hg19_1.1.0.tgz
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