To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("HiCDataHumanIMR90")

In most cases, you don't need to download the package archive at all.

HiCDataHumanIMR90

Human IMR90 Fibroblast HiC data from Dixon et al. 2012

Bioconductor version: 3.0

The HiC data from Human Fibroblast IMR90 cell line (HindIII restriction) was retrieved from the GEO website, accession number GSE35156 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE35156). The raw reads were processed as explained in Dixon et al. (Nature 2012).

Author: Nicolas Servant

Maintainer: Nicolas Servant <Nicolas.Servant at curie.fr>

Citation (from within R, enter citation("HiCDataHumanIMR90")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("HiCDataHumanIMR90")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HiCDataHumanIMR90")

PDF	R Script	HiC Data Human Fibroblast Dixon et al. 2012
PDF		Reference Manual

Details

biocViews	ExperimentData, HighThroughputSequencingData
Version	1.0.0
License	GPL-3
Depends	R (>= 2.10)
Imports
LinkingTo
Suggests	HiTC
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	HiCDataHumanIMR90_1.0.0.tar.gz
Windows Binary	HiCDataHumanIMR90_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	HiCDataHumanIMR90_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	HiCDataHumanIMR90_1.0.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

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