Annotation for the copy number analysis of deep sequencing cancer data with seqCNA

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Documentation for package ‘seqCNA.annot’ version 1.1.1

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seqCNA.annot-package Annotation for the copy number analysis of deep sequencing cancer data with seqCNA
hg18 A table with GC content, mappability and presence of common CNVs for the hg18 human genome build.
hg18_len A table with information on chromosome lengths for the hg18 human genome build.
hg19 A table with GC content, mappability and presence of common CNVs for the hg19 human genome build.
hg19_len A table with information on chromosome lengths for the hg19 human genome build.
seqCNA.annot Annotation for the copy number analysis of deep sequencing cancer data with seqCNA
supported.builds Names of the genome builds for which the package contains annotation.