Arora2010 | Raw and processed data for the application of PANs to Ewing's sarcoma |
Arora2010.BMfitting | Fitting a beta-mixture model to association scores |
Arora2010.fig | A pipeline function to reproduce the main figures of network analyses in Wang et al 2012 for Arora S et al 2010 |
Arora2010.hypergeo | Hypergeometric tests for pathway analysis |
Arora2010.InferPAN | Infer a posterior association network given a fitted BetaMixture object |
Arora2010.module.visualize | Infer a posterior association network given a fitted BetaMixture object |
Arora2010.ModuleSearchByPvclust | Searching for enriched functional modules by pvclust |
Arora2010.pathway | Raw and processed data for the application of PANs to Ewing's sarcoma |
Arora2010.pipeline | A pipeline to do network analyses in Wang et al 2012 for Arora S et al 2010 |
bm_Arora2010 | Raw and processed data for the application of PANs to Ewing's sarcoma |
bm_ext_Mulder2012 | Raw and processed data for the application to epidermal stem cells |
bm_Mulder2012 | Raw and processed data for the application to epidermal stem cells |
dist.pvclust4PAN | Compute distances between gene phenotypes for pvclust |
GSEARandomWalkFig | Plot a figure illustrating enrichment analysis results |
Mulder2012 | Raw and processed data for the application to epidermal stem cells |
Mulder2012.BMfitting | Fitting a beta-mixture model to association scores |
Mulder2012.BMfitting.extended | Fitting a beta-mixture model to association scores |
Mulder2012.fig | A pipeline function to reproduce the main figures of network analyses in Mulder K et al 2012 and Wang et al 2012 |
Mulder2012.InferPAN | Infer a posterior association network given a fitted BetaMixture object |
Mulder2012.module.visualize | Infer a posterior association network given a fitted BetaMixture object |
Mulder2012.ModuleSearchByPvclust | Searching for enriched functional modules by pvclust |
Mulder2012.PINdbProteins | Raw and processed data for the application to epidermal stem cells |
Mulder2012.pipeline | A pipeline to do network analyses for Mulder 2012 |
Mulder2012.PPI | Raw and processed data for the application to epidermal stem cells |
Mulder2012.PPIEnrich | Raw and processed data for the application to epidermal stem cells |
Mulder2012.PPIenrich | Enrichment analyses of posterior probabilities in protein-protein interactions |
Mulder2012.PPIPre | Extracting protein-protein interactions from PINdb |
Mulder2012.rawScreenAnnotation | Raw and processed data for the application to epidermal stem cells |
Mulder2012.rawScreenData | Raw and processed data for the application to epidermal stem cells |
Mulder2012.RNAiPre | Preprocessing of the raw RNAi screens |
pan_Arora2010 | Raw and processed data for the application of PANs to Ewing's sarcoma |
pan_ext_Mulder2012 | Raw and processed data for the application to epidermal stem cells |
pan_Mulder2012 | Raw and processed data for the application to epidermal stem cells |
parPvclust4PAN | Compute distances between gene phenotypes for pvclust |
PINdbProteins | Raw and processed data for the application to epidermal stem cells |
PPI | Raw and processed data for the application to epidermal stem cells |
PPIEnrich_Mulder2012 | Raw and processed data for the application to epidermal stem cells |
proteinModules | Raw and processed data for the application to epidermal stem cells |
pw.rslt | Raw and processed data for the application of PANs to Ewing's sarcoma |
rawScreenAnnotation | Raw and processed data for the application to epidermal stem cells |
rawScreenData | Raw and processed data for the application to epidermal stem cells |