To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SNPlocs.Hsapiens.dbSNP141.GRCh38")

In most cases, you don't need to download the package archive at all.

SNPlocs.Hsapiens.dbSNP141.GRCh38

SNP locations for Homo sapiens (dbSNP Build 141)

Bioconductor version: 3.0

SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 141. The source data files used for this package were created by NCBI on May 1st, 2014, and contain SNPs mapped to reference genome GRCh38. Note that these SNPs can be "injected" in BSgenome.Hsapiens.NCBI.GRCh38 or in BSgenome.Hsapiens.UCSC.hg38.

Author: Herve Pages

Maintainer: H. Pages <hpages at fhcrc.org>

Citation (from within R, enter citation("SNPlocs.Hsapiens.dbSNP141.GRCh38")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SNPlocs.Hsapiens.dbSNP141.GRCh38")

Documentation


PDF		Reference Manual

Details

biocViews	AnnotationData, Genetics, Homo_sapiens, SNPlocs
Version	0.99.10
License	Artistic-2.0
Depends	R (>= 2.10), S4Vectors, IRanges, GenomicRanges, BSgenome(>= 1.33.9)
Imports	methods, utils, S4Vectors, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests	Biostrings, BSgenome.Hsapiens.NCBI.GRCh38(>= 1.3.19)
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	SNPlocs.Hsapiens.dbSNP141.GRCh38_0.99.10.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Package Downloads Report	Download Stats

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