To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MafDb.ALL.wgs.phase1.release.v3.20101123")

In most cases, you don't need to download the package archive at all.

MafDb.ALL.wgs.phase1.release.v3.20101123

Minimum allele frequency data from the 1000 Genomes project

Bioconductor version: 3.0

This annotation package stores minimum allele frequency data frozen from the 1000 Genomes project

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.ALL.wgs.phase1.release.v3.20101123")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MafDb.ALL.wgs.phase1.release.v3.20101123")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AnnotationData, Genetics, Homo_sapiens, MafDb
Version 3.0.0
License Artistic-2.0
Depends R (>= 3.0.0), VariantFiltering(>= 1.2.4)
Imports RSQLite (>= 1.0.0), Biobase, AnnotationDbi, IRanges, Biostrings, Rsamtools, GenomicRanges, VariantAnnotation
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me VariantFiltering

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MafDb.ALL.wgs.phase1.release.v3.20101123_3.0.0.tar.gz
Windows Binary MafDb.ALL.wgs.phase1.release.v3.20101123_3.0.0.zip
Mac OS X 10.6 (Snow Leopard) MafDb.ALL.wgs.phase1.release.v3.20101123_3.0.0.tgz
Mac OS X 10.9 (Mavericks) MafDb.ALL.wgs.phase1.release.v3.20101123_3.0.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center