To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Cfamiliaris.UCSC.canFam2")

In most cases, you don't need to download the package archive at all.

BSgenome.Cfamiliaris.UCSC.canFam2

Full genome sequences for Canis lupus familiaris (UCSC version canFam2)

Bioconductor version: 3.0

Full genome sequences for Canis lupus familiaris (Dog) as provided by UCSC (canFam2, May 2005) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Cfamiliaris.UCSC.canFam2")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Cfamiliaris.UCSC.canFam2")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Canis_familiaris, Genetics
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
LinkingTo
Suggests GenomicFeatures
SystemRequirements
Enhances
URL
Depends On Me BSgenome.Cfamiliaris.UCSC.canFam2.masked
Imports Me BSgenome.Cfamiliaris.UCSC.canFam2.masked
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Cfamiliaris.UCSC.canFam2_1.4.0.tar.gz
Windows Binary BSgenome.Cfamiliaris.UCSC.canFam2_1.4.0.zip
Mac OS X 10.6 (Snow Leopard) BSgenome.Cfamiliaris.UCSC.canFam2_1.4.0.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Cfamiliaris.UCSC.canFam2_1.4.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center