To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ssviz")

In most cases, you don't need to download the package archive at all.

ssviz

A small RNA-seq visualizer and analysis toolkit

Bioconductor version: 3.0

Small RNA sequencing viewer

Author: Diana Low

Maintainer: Diana Low <dlow at imcb.a-star.edu.sg>

Citation (from within R, enter citation("ssviz")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ssviz")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ssviz")

 

PDF R Script ssviz
PDF   Reference Manual
Text   NEWS

Details

biocViews Genetics, MultipleComparison, RNASeq, Sequencing, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 3.0 (R-3.1)
License GPL-2
Depends R (>= 2.15.1), methods, Rsamtools, Biostrings, reshape, ggplot2, RColorBrewer
Imports
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ssviz_1.0.0.tar.gz
Windows Binary ssviz_1.0.0.zip
Mac OS X 10.6 (Snow Leopard) ssviz_1.0.0.tgz
Mac OS X 10.9 (Mavericks) ssviz_1.0.0.tgz
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