To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("keggorthology")

In most cases, you don't need to download the package archive at all.

keggorthology

graph support for KO, KEGG Orthology

Bioconductor version: 3.0

graphical representation of the Feb 2010 KEGG Orthology. The KEGG orthology is a set of pathway IDs that are not to be confused with the KEGG ortholog IDs.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("keggorthology")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("keggorthology")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("keggorthology")

PDF	R Script	keggorthology overview
PDF		Reference Manual

Details

biocViews	GraphAndNetwork, Pathways, Software, Visualization
Version	2.18.0
In Bioconductor since	BioC 2.6 (R-2.11)
License	Artistic-2.0
Depends	R (>= 2.5.0), stats, graph, hgu95av2.db
Imports	AnnotationDbi, graph, DBI, graph, grDevices, methods, stats, tools, utils
LinkingTo
Suggests	RBGL, ALL
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	MLInterfaces
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	keggorthology_2.18.0.tar.gz
Windows Binary	keggorthology_2.18.0.zip
Mac OS X 10.6 (Snow Leopard)	keggorthology_2.18.0.tgz
Mac OS X 10.9 (Mavericks)	keggorthology_2.18.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

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