To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

In most cases, you don't need to download the package archive at all.

Rtreemix

Rtreemix: Mutagenetic trees mixture models.

Bioconductor version: 3.0

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina.bogojeska at gmail.com>

Citation (from within R, enter citation("Rtreemix")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rtreemix")

PDF	R Script	Rtreemix
PDF		Reference Manual

Details

biocViews	Software, StatisticalMethod
Version	1.28.0
In Bioconductor since	BioC 2.2 (R-2.7)
License	LGPL
Depends	R (>= 2.5.0)
Imports	methods, graph, Biobase, Hmisc
LinkingTo
Suggests	Rgraphviz
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	Rtreemix_1.28.0.tar.gz
Windows Binary	Rtreemix_1.28.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	Rtreemix_1.28.0.tgz
Mac OS X 10.9 (Mavericks)	Rtreemix_1.28.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

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