To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ARRmNormalization")

In most cases, you don't need to download the package archive at all.

ARRmNormalization

Adaptive Robust Regression normalization for Illumina methylation data

Bioconductor version: 3.0

Perform the Adaptive Robust Regression method (ARRm) for the normalization of methylation data from the Illumina Infinium HumanMethylation 450k assay.

Author: Jean-Philippe Fortin, Celia M.T. Greenwood, Aurelie Labbe.

Maintainer: Jean-Philippe Fortin <jfortin at jhsph.edu>

Citation (from within R, enter citation("ARRmNormalization")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ARRmNormalization")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ARRmNormalization")

PDF	R Script	ARRmNormalization
PDF		Reference Manual

Details

biocViews	DNAMethylation, Microarray, Preprocessing, Software, TwoChannel
Version	1.6.0
In Bioconductor since	BioC 2.12 (R-3.0)
License	Artistic-2.0
Depends	R (>= 2.15.1), ARRmData
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	ARRmNormalization_1.6.0.tar.gz
Windows Binary	ARRmNormalization_1.6.0.zip
Mac OS X 10.6 (Snow Leopard)	ARRmNormalization_1.6.0.tgz
Mac OS X 10.9 (Mavericks)	ARRmNormalization_1.6.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

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