SigCheck-package |
Check a gene signature's classification performance against random signatures, permuted data, and known signatures. |
knownSignatures |
Previously identified gene signatures for use in 'sigCheckKnown' |
nkiResults |
Precomputed list of results for a call to 'sigCheck' using the 'breastCancerNKI' dataset. |
resultsNKI |
Previously identified gene signatures for use in 'sigCheckKnown' |
SigCheck |
Check a gene signature's classification performance against random signatures, permuted data, and known signatures. |
sigCheck |
Check classification potential of a gene signature against randomly selected gene signatures, known gene signatures, and permuted expression sets. |
sigCheckClassifier |
Establish baseline classification performance for a signature |
sigCheckKnown |
Check classification performance of signature against a panel of known gene signatures |
sigCheckPermuted |
Check classification performance of signature on randomly permuted data |
sigCheckPlot |
Plot results of a signature check |
sigCheckRandom |
Check classification performance of signatures composed of randomly selected features |