OTUbase-package | The OTUbase package: A tool for organizing and manipulating Operational Taxonomic Unit data |
abundance | abundance |
abundance-method | abundance |
aData | assignmentData |
aData-method | assignmentData |
aData<- | assignmentData |
aData<--method | assignmentData |
assignmentData | assignmentData |
assignmentData-method | assignmentData |
assignmentData<- | assignmentData |
assignmentData<--method | assignmentData |
assignmentLabels | assignmentData |
assignmentLabels-method | assignmentData |
assignmentLabels<- | assignmentData |
assignmentLabels<--method | assignmentData |
assignmentNames | assignmentData |
assignmentNames-method | assignmentData |
clusterSamples | clusterSamples |
clusterSamples-generic | clusterSamples |
clusterSamples-method | clusterSamples |
getOTUs | Other functions |
getSamples | Other functions |
notus | Other Generics |
notus-method | Other Generics |
nsamples | Other Generics |
nsamples-method | Other Generics |
OTUbase | The OTUbase package: A tool for organizing and manipulating Operational Taxonomic Unit data |
otuID | Accessor functions for OTUset and TAXset objects |
otuID-method | Accessor functions for OTUset and TAXset objects |
otuseqplot | Other functions |
OTUset | "OTUset" class for OTU data |
OTUsetB | "OTUset" class for OTU data |
OTUsetB-class | "OTUset" class for OTU data |
OTUsetF | "OTUset" class for OTU data |
OTUsetF-class | "OTUset" class for OTU data |
OTUsetQ | "OTUset" class for OTU data |
OTUsetQ-class | "OTUset" class for OTU data |
otusize | Other functions |
otuspersample | Other functions |
o_diversity | Other functions |
o_estimateR | Other functions |
readOTUset | readOTUset |
readTAXset | readTAXset |
rseqplot | Other functions |
sampleData | sampleData |
sampleData-method | sampleData |
sampleData<- | sampleData |
sampleData<--method | sampleData |
sampleID | Accessor functions for OTUset and TAXset objects |
sampleID-method | Accessor functions for OTUset and TAXset objects |
sampleLabels | sampleData |
sampleLabels-method | sampleData |
sampleLabels<- | sampleData |
sampleLabels<--method | sampleData |
sData | sampleData |
sData-method | sampleData |
sData<- | sampleData |
sData<--method | sampleData |
seqnames | Other Generics |
seqnames-method | Other Generics |
seqspersample | Other functions |
sharedotus | Other functions |
subOTUset | subOTUset |
subTAXset | subTAXset |
tax | Accessor functions for OTUset and TAXset objects |
tax-method | Accessor functions for OTUset and TAXset objects |
tax<- | Accessor functions for OTUset and TAXset objects |
tax<--method | Accessor functions for OTUset and TAXset objects |
TAXset | "TAXset" class for TAX data |
TAXsetB | "TAXset" class for TAX data |
TAXsetB-class | "TAXset" class for TAX data |
TAXsetF | "TAXset" class for TAX data |
TAXsetF-class | "TAXset" class for TAX data |
TAXsetQ | "TAXset" class for TAX data |
TAXsetQ-class | "TAXset" class for TAX data |