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oligoData
Dataset samples for the oligo package
Bioconductor version: 2.9
Dataset samples (Affymetrix: Expression, Gene, Exon, SNP; NimbleGen: Expression, Tiling) to be used with the oligo package.
Author: Benilton Carvalho
Maintainer: Benilton Carvalho <Benilton.Carvalho at cancer.org.uk>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("oligoData")
To cite this package in a publication, start R and enter:
citation("oligoData")
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData |
| Depends | R (>= 2.10.0), oligo |
| Imports | |
| Suggests | pd.hg.u95av2, pd.huex.1.0.st.v2, pd.mapping50k.xba240, pd.hg18.60mer.expr, pd.2006.07.18.hg18.refseq.promoter, pd.hugene.1.0.st.v1 |
| System Requirements | |
| License | LGPL (>= 2) |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | oligo |
| Version | 1.4.0 |
Package Downloads
| Package Source | oligoData_1.4.0.tar.gz |
| Windows Binary | oligoData_1.4.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | oligoData_1.4.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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