phenoDist

Phenotypic distance measures

Bioconductor version: 2.9

PhenoDist is designed for measuring phenotypic distance in image-based high-throughput screening, in order to identify strong phenotypes and to group treatments into functional clusters.

Author: Xian Zhang, Gregoire Pau, Wolfgang Huber, Michael Boutros

Maintainer: Xian Zhang <x.zhang at dkfz.de>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("phenoDist")

To cite this package in a publication, start R and enter:

    citation("phenoDist")

Documentation

PDF	R Script	Introduction to phenoDist
PDF		Reference Manual

Details

biocViews	CellBasedAssays, Bioinformatics
Depends	R (>= 2.9.0), imageHTS, e1071
Imports
Suggests	GOstats, MASS
System Requirements
License	LGPL-2.1
URL	http://www.dkfz.de/signaling, http://www.embl.de/research/units/genome_biology/huber/
Depends On Me
Imports Me
Suggests Me
Version	1.2.0
Since	Bioconductor 2.8 (R-2.13)

Package Downloads

Package Source	phenoDist_1.2.0.tar.gz
Windows Binary	phenoDist_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary
Package Downloads Report	Download Stats

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