maanova

Tools for analyzing Micro Array experiments

Bioconductor version: 2.9

Analysis of N-dye Micro Array experiment using mixed model effect. Containing analysis of variance, permutation and bootstrap, cluster and consensus tree.

Author: Hao Wu, modified by Hyuna Yang and Keith Sheppard with ideas from Gary Churchill, Katie Kerr and Xiangqin Cui.

Maintainer: Keith Sheppard <keith.sheppard at jax.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("maanova")

To cite this package in a publication, start R and enter:

    citation("maanova")

Documentation

PDF		abf1fig.pdf
PDF		hckidney.pdf
PDF	R Script	R/maanova HowTo
PDF		vgprofile.pdf
PDF		Reference Manual

Details

biocViews	Microarray, DifferentialExpression, Clustering
Depends	R (>= 2.7.0)
Imports	Biobase, graphics, grDevices, methods, stats, utils
Suggests	qvalue, snow
System Requirements
License	GPL (>= 2)
URL	http://research.jax.org/faculty/churchill
Depends On Me
Imports Me
Suggests Me
Version	1.24.0
Since	Bioconductor 1.7 (R-2.2)

Package Downloads

Package Source	maanova_1.24.0.tar.gz
Windows Binary	maanova_1.24.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	maanova_1.24.0.tgz
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center