Tools for analyzing Micro Array experiments

Bioconductor version: 2.9

Analysis of N-dye Micro Array experiment using mixed model effect. Containing analysis of variance, permutation and bootstrap, cluster and consensus tree.

Author: Hao Wu, modified by Hyuna Yang and Keith Sheppard with ideas from Gary Churchill, Katie Kerr and Xiangqin Cui.

Maintainer: Keith Sheppard <keith.sheppard at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF abf1fig.pdf
PDF hckidney.pdf
PDF R Script R/maanova HowTo
PDF vgprofile.pdf
PDF   Reference Manual


biocViews Microarray, DifferentialExpression, Clustering
Depends R (>= 2.7.0)
Imports Biobase, graphics, grDevices, methods, stats, utils
Suggests qvalue, snow
System Requirements
License GPL (>= 2)
Depends On Me
Imports Me
Suggests Me
Version 1.24.0
Since Bioconductor 1.7 (R-2.2)

Package Downloads

Package Source maanova_1.24.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) binary maanova_1.24.0.tgz
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Fred Hutchinson Cancer Research Center