GRAPH Interaction from pathway Topological Environment

Bioconductor version: 2.9

Graph objects from pathway topology derived from NCI, KEGG, Biocarta and Reactome databases.

Author: Gabriele Sales <gabriele.sales at>, Enrica Calura <enrica.calura at>, Chiara Romualdi <chiara.romualdi at>

Maintainer: Gabriele Sales <gabriele.sales at>

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PDF R Script GRAPH Interaction from pathway Topological Environment
PDF   Reference Manual


biocViews Pathways
Depends R (>= 2.10), graph
Imports AnnotationDbi, graph, graphics, methods,, stats, utils
Suggests DEGraph(>= 1.4), hgu133plus2.db, RCytoscape(>= 1.2), SPIA(>= 2.2), topologyGSA (>= 1.0)
System Requirements
License AGPL-3
Depends On Me
Imports Me
Suggests Me
Version 1.0.0
Since Bioconductor 2.9 (R-2.14)

Package Downloads

Package Source graphite_1.0.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) binary graphite_1.0.0.tgz
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