flowClust

Clustering for Flow Cytometry

Bioconductor version: 2.9

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

Author: Raphael Gottardo <raph at stat.ubc.ca>, Kenneth Lo <c.lo at stat.ubc.ca>

Maintainer: Raphael Gottardo <raph at stat.ubc.ca>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("flowClust")

To cite this package in a publication, start R and enter:

    citation("flowClust")

Documentation

PDF	R Script	flowClust package
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	Clustering, Bioinformatics, Visualization, FlowCytometry
Depends	R(>= 2.5.0), methods, mnormt, ellipse, Biobase, flowCore(>= 1.11.23)
Imports
Suggests	snowfall
System Requirements
License	Artistic-2.0
URL
Depends On Me	flowMerge, flowTrans
Imports Me	flowMerge, flowPhyto, flowTrans, flowType
Suggests Me
Version	2.12.1
Since	Bioconductor 2.2 (R-2.7)

Package Downloads

Package Source	flowClust_2.12.1.tar.gz
Windows Binary	flowClust_2.12.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	flowClust_2.12.1.tgz
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center