biocGraph

Graph examples and use cases in Bioinformatics

Bioconductor version: 2.9

This package provides examples and code that make use of the different graph related packages produced by Bioconductor.

Author: Li Long <li.long at isb-sib.ch>, Robert Gentleman <rgentlem at fhcrc.org>, Seth Falcon <sethf at fhcrc.org> Florian Hahne <fhahne at fhcrc.org>

Maintainer: Florian Hahne <florian.hahne at novartis.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("biocGraph")

To cite this package in a publication, start R and enter:

    citation("biocGraph")

Documentation

PDF	R Script	Examples of plotting graphs Using Rgraphviz
PDF	R Script	HOWTO layout pathways
PDF		Reference Manual

Details

biocViews	GraphsAndNetworks
Depends	Rgraphviz, graph
Imports	Rgraphviz, geneplotter, graph, IRanges, methods
Suggests	fibroEset, geneplotter, hgu95av2.db
System Requirements
License	Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me	BiocCaseStudies, RTools4TB
Version	1.16.1
Since	Bioconductor 2.1 (R-2.6)

Package Downloads

Package Source	biocGraph_1.16.1.tar.gz
Windows Binary	biocGraph_1.16.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	biocGraph_1.16.1.tgz
Package Downloads Report	Download Stats

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