aroma.light

Light-weight methods for normalization and visualization of microarray data using only basic R data types

Bioconductor version: 2.9

Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.

Author: Henrik Bengtsson <henrikb at braju.com>

Maintainer: Henrik Bengtsson <henrikb at braju.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("aroma.light")

To cite this package in a publication, start R and enter:

    citation("aroma.light")

Documentation


PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, Microarray, OneChannel, TwoChannel, MultiChannel, Visualization, Preprocessing
Depends	R.methodsS3 (>= 1.2.1)
Imports
Suggests	R.oo (>= 1.8.2), R.utils (>= 1.8.2), princurve (>= 1.1-10)
System Requirements
License	LGPL (>= 2.1)
URL	http://www.aroma-project.org/
Depends On Me	EDASeq
Imports Me
Suggests Me	pcaMethods
Version	1.22.0
Since	Bioconductor 1.9 (R-2.4)

Package Downloads

Package Source	aroma.light_1.22.0.tar.gz
Windows Binary	aroma.light_1.22.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	aroma.light_1.22.0.tgz
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center