RTCA

Open-source toolkit to analyse data from xCELLigence System (RTCA)

Bioconductor version: 2.9

Import, analyze and visualize data from Roche(R) xCELLigence RTCA systems. The package imports real-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system, the Bioconductor package RTCA provides several unique transformation (normalization) strategies and various visualization tools.

Author: Jitao David Zhang

Maintainer: Jitao David Zhang <davidvonpku at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RTCA")

To cite this package in a publication, start R and enter:

    citation("RTCA")

Documentation

PDF R Script Introduction to Data Analysis of the Roche xCELLigence System with RTCA Package
PDF R Script RTCAtransformation: Discussion of transformation methods of RTCA data
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBasedAssays, Infrastructure, Visualization, TimeCourse
Depends methods, stats, graphics, Biobase, RColorBrewer, gtools
Imports
Suggests xtable
System Requirements
License LGPL-3
URL http://code.google.com/p/xcelligence/, http://www.xcelligence.roche.com/, http://www.nextbiomotif.com/Home/scientific-programming
Depends On Me
Imports Me
Suggests Me
Version 1.6-1
Since Bioconductor 2.5 (R-2.10)

Package Downloads

Package Source RTCA_1.6-1.tar.gz
Windows Binary RTCA_1.6-1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary RTCA_1.6-1.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center