MBCB
MBCB (Model-based Background Correction for Beadarray)
Bioconductor version: 2.9
This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.
Author: Yang Xie <Yang.Xie at UTSouthwestern.edu>
Maintainer: Jeff Allen <Jeffrey.Allen at UTSouthwestern.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("MBCB")
To cite this package in a publication, start R and enter:
citation("MBCB")
Documentation
| R Script | MBCB | |
| Reference Manual |
Details
| biocViews | Microarray, Preprocessing |
| Depends | R (>= 2.9.0), tcltk, tcltk2 |
| Imports | preprocessCore, stats, utils |
| Suggests | |
| System Requirements | |
| License | GPL (>= 2) |
| URL | http://www.utsouthwestern.edu |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.8.0 |
| Since | Bioconductor 2.7 (R-2.12) |
Package Downloads
| Package Source | MBCB_1.8.0.tar.gz |
| Windows Binary | MBCB_1.8.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | MBCB_1.8.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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