LBE
Estimation of the false discovery rate.
Bioconductor version: 2.9
LBE is an efficient procedure for estimating the proportion of true null hypotheses, the false discovery rate (and so the q-values) in the framework of estimating procedures based on the marginal distribution of the p-values without assumption for the alternative hypothesis.
Author: Cyril Dalmasso
Maintainer: Cyril Dalmasso <dalmasso at vjf.inserm.fr>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("LBE")
To cite this package in a publication, start R and enter:
citation("LBE")
Documentation
| R Script | LBE Vignette | |
| Reference Manual |
Details
| biocViews | Bioinformatics, MultipleComparisons |
| Depends | stats |
| Imports | graphics, grDevices, methods, stats, utils |
| Suggests | qvalue |
| System Requirements | |
| License | GPL-2 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.22.0 |
| Since | Bioconductor 2.0 (R-2.5) |
Package Downloads
| Package Source | LBE_1.22.0.tar.gz |
| Windows Binary | LBE_1.22.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | LBE_1.22.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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