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DECIPHER
Database Enabled Code for Ideal Probe Hybridization Employing R
Bioconductor version: 2.9
A toolset that assist in the design of hybridization probes.
Author: Erik Wright
Maintainer: Erik Wright <DECIPHER at cae.wisc.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("DECIPHER")
To cite this package in a publication, start R and enter:
citation("DECIPHER")
Documentation
| R Script | Finding Chimeric Sequences | |
| R Script | Getting Started DECIPHERing | |
| Reference Manual |
Details
| biocViews | Clustering, Genetics, Sequencing, Infrastructure, DataImport, Visualization, Microarray, QualityControl |
| Depends | R (>= 2.13.0), Biostrings(>= 2.16), RSQLite (>= 0.9), IRanges, stats |
| Imports | Biostrings, RSQLite, IRanges, stats |
| Suggests | |
| System Requirements | |
| License | GPL-3 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.0.0 |
| Since | Bioconductor 2.9 (R-2.14) |
Package Downloads
| Package Source | DECIPHER_1.0.0.tar.gz |
| Windows Binary | DECIPHER_1.0.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | DECIPHER_1.0.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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