Static visualization for genomic data.


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Documentation for package ‘ggbio’ version 1.0.4

Help Pages

geom_chevron Chevron Geoms for GRanges object
geom_hotregion Adding hotregion for stacked overview (genome-wide)
plotFragLength Plot estimated fragment length for paired-end RNA-seq data
plotFragLength-method Plot estimated fragment length for paired-end RNA-seq data
plotGrandLinear Manhattan for GWAS
plotMismatchSum Plot mismatch summary for short read
plotOverview Plot stacked overview for genome
plotRangesLinkedToData Plot Ranges Linked with Data
plotSingleChrom Plot single chromosome with cytoband
plotSpliceSum Plot Splice Summary from RNA-seq data
plotSpliceSum-method Plot Splice Summary from RNA-seq data
qplot Generic qplot function
qplot-method Generic qplot function
rescale rescale ggplot object
rescale-method rescale ggplot object
tracks Tracks for genomic graphics