To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mosaics")

In most cases, you don't need to download the package archive at all.

mosaics

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see mosaics.

MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq)

Bioconductor version: 2.8

This package provides functions for fitting MOSAiCS, a statistical framework to analyze one-sample or two-sample ChIP-seq data.

Author: Dongjun Chung, Pei Fen Kuan, Sunduz Keles

Maintainer: Dongjun Chung <chungdon at stat.wisc.edu>

Citation (from within R, enter citation("mosaics")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mosaics")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mosaics")

PDF		mosaics-example.pdf
PDF		Reference Manual

biocViews	Bioinformatics, ChIPseq, Genetics, Sequencing, Software, Transcription
Version	1.0.1
In Bioconductor since	BioC 2.8 (R-2.13) (5 years)
License	GPL (>= 2)
Depends	R (>= 2.11.1), methods, graphics
Imports	MASS, splines, lattice, IRanges
LinkingTo
Suggests	mosaicsExample, rtracklayer, cosmo
SystemRequirements
Enhances
URL	http://groups.google.com/group/mosaics_user_group
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	mosaics_1.0.1.tar.gz
Windows Binary	mosaics_1.0.1.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/mosaics/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/mosaics/
Package Downloads Report	Download Stats

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