To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("clstutils")

In most cases, you don't need to download the package archive at all.

clstutils

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see clstutils.

Tools for performing taxonomic assignment.

Bioconductor version: 2.8

Tools for performing taxonomic assignment based on phylogeny using pplacer and clst.

Author: Noah Hoffman

Maintainer: Noah Hoffman <ngh2 at uw.edu>

Citation (from within R, enter citation("clstutils")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("clstutils")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("clstutils")

biocViews	Classification, HighThroughputSequencing, QualityControl, Software, Visualization
Version	1.0.0
In Bioconductor since	BioC 2.8 (R-2.13) (5 years)
License	GPL-3
Depends	R (>= 2.10), clst, rjson, ape
Imports	lattice, RSQLite
LinkingTo
Suggests	RUnit, RSVGTipsDevice
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	clstutils_1.0.0.tar.gz
Windows Binary	clstutils_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/clstutils/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/clstutils/
Package Downloads Report	Download Stats

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