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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RMAPPER")
In most cases, you don't need to download the package archive at all.
RMAPPER
|
This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see RMAPPER.
R interface to the MAPPER database of transcription factor binding sites
Bioconductor version: 2.8
The RMAPPER package allows you to retrieve a set of predicted transcription factor binding sites from the MAPPER database (http://genome.ufl.edu/mapper/) through a simple HTTP request.
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: Heike Sichtig <hsichtig at ufl.edu>, Alberto Riva <ariva at ufl.edu>
Citation (from within R,
enter citation("RMAPPER")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RMAPPER")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RMAPPER")
| readMAPPER.pdf | ||
| Reference Manual |
Details
| biocViews | Annotation, Genetics, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (10 years) |
| License | Artistic 2.0 |
| Depends | methods |
| Imports | |
| LinkingTo | |
| Suggests | RCurl |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | RMAPPER_1.2.0.tar.gz |
| Windows Binary | RMAPPER_1.2.0.zip |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/RMAPPER/tree/release-2.8 |
| Package Short Url | http://bioconductor.org/packages/RMAPPER/ |
| Package Downloads Report | Download Stats |
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