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To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("unifiedWMWqPCR")
In most cases, you don't need to download the package archive at all.
unifiedWMWqPCR
Unified Wilcoxon-Mann Whitney Test for testing differential expression in qPCR data
Bioconductor version: 2.14
This packages implements the unified Wilcoxon-Mann-Whitney Test for qPCR data. This modified test allows for testing differential expression in qPCR data.
Author: Jan R. De Neve & Joris Meys
Maintainer: Joris Meys <Joris.Meys at UGent.be>
Citation (from within R,
enter citation("unifiedWMWqPCR")):
Installation
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("unifiedWMWqPCR")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("unifiedWMWqPCR")
| R Script | unifiedWMWqPCR | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | DifferentialExpression, GeneExpression, MicrotitrePlateAssay, MultipleComparison, QualityControl, Software, Visualization, qPCR |
| Version | 1.0.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) |
| License | GPL (>=2) |
| Depends | methods |
| Imports | BiocGenerics, stats, graphics, HTqPCR |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | unifiedWMWqPCR_1.0.0.tar.gz |
| Windows Binary | unifiedWMWqPCR_1.0.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | unifiedWMWqPCR_1.0.0.tgz |
| Mac OS X 10.9 (Mavericks) | unifiedWMWqPCR_1.0.0.tgz |
| Browse/checkout source | (username/password: readonly) |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Counting Reads for Differential Expression (parathyroideSE vignette)
- Annotation
- Annotating Variants
- Annotating Ranges
- Flow Cytometry and other assays
- Candidate Binding Sites for Known Transcription Factors
- Cloud-enabled cis-eQTL search and annotation
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