To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("msmsEDA")

In most cases, you don't need to download the package archive at all.

msmsEDA

Exploratory Data Analysis of LC-MS/MS data by spectral counts

Bioconductor version: 2.14

Exploratory data analysis to assess the quality of a set of LC-MS/MS experiments, and visualize de influence of the involved factors.

Author: Josep Gregori, Alex Sanchez, and Josep Villanueva

Maintainer: Josep Gregori <josep.gregori at gmail.com>

Citation (from within R, enter citation("msmsEDA")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("msmsEDA")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("msmsEDA")

PDF	R Script	msmsEDA: Batch effects detection in LC-MSMS experiments
PDF		Reference Manual

biocViews	MassSpectrometry, Proteomics, Software
Version	1.2.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-2
Depends	R (>= 3.0.1), MSnbase
Imports	MASS, gplots, RColorBrewer
Suggests
System Requirements
URL
Depends On Me	msmsTests
Imports Me
Suggests Me

Follow Installation instructions to use this package in your R session.

Common Bioconductor workflows include:

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!