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Gene Ontology analyser for RNA-seq and other length biased data

Bioconductor version: 2.14

Detects Gene Ontology and/or other user defined categories which are over/under represented in RNA-seq data

Author: Matthew Young

Maintainer: Nadia Davidson <nadia.davidson at>

Citation (from within R, enter citation("goseq")):


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PDF R Script goseq User's Guide
PDF   Reference Manual


biocViews GO, GeneExpression, RNASeq, Sequencing, Software, Transcription
Version 1.16.2
In Bioconductor since BioC 2.6 (R-2.11)
License LGPL (>= 2)
Depends R (>= 2.11.0), BiasedUrn, geneLenDataBase
Imports mgcv, graphics, stats, utils, AnnotationDbi
Suggests GO.db, edgeR,, rtracklayer
System Requirements
Depends On Me
Imports Me
Suggests Me oneChannelGUI

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Package Source goseq_1.16.2.tar.gz
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Mac OS X 10.6 (Snow Leopard) goseq_1.16.2.tgz
Mac OS X 10.9 (Mavericks) goseq_1.16.2.tgz
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