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To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("cisPath")
In most cases, you don't need to download the package archive at all.
cisPath
Visualization and management of the protein-protein interaction networks.
Bioconductor version: 2.14
cisPath is an R package that uses web browsers to visualize and manage protein-protein interaction networks.
Author: Likun Wang <wanglk at hsc.pku.edu.cn>
Maintainer: Likun Wang <wanglk at hsc.pku.edu.cn>
Citation (from within R,
enter citation("cisPath")):
Installation
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("cisPath")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cisPath")
| R Script | cisPath | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Proteomics, Software |
| Version | 1.4.8 |
| In Bioconductor since | BioC 2.12 (R-3.0) |
| License | GPL (>= 3) |
| Depends | R (>= 2.10.0) |
| Imports | methods, utils |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | cisPath_1.4.8.tar.gz |
| Windows Binary | cisPath_1.4.8.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | cisPath_1.4.8.tgz |
| Mac OS X 10.9 (Mavericks) | cisPath_1.4.8.tgz |
| Browse/checkout source | (username/password: readonly) |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Counting Reads for Differential Expression (parathyroideSE vignette)
- Annotation
- Annotating Variants
- Annotating Ranges
- Flow Cytometry and other assays
- Candidate Binding Sites for Known Transcription Factors
- Cloud-enabled cis-eQTL search and annotation
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