To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("Rdisop")
In most cases, you don't need to download the package archive at all.
Rdisop
Decomposition of Isotopic Patterns
Bioconductor version: 2.14
Identification of metabolites using high precision mass spectrometry. MS Peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.
Author: Anton Pervukhin <apervukh at minet.uni-jena.de>, Steffen Neumann <sneumann at ipb-halle.de>
Maintainer: Steffen Neumann <sneumann at ipb-halle.de>
Citation (from within R,
enter citation("Rdisop")):
Installation
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("Rdisop")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Rdisop")
| R Script | Molecule Identification with Rdisop | |
| Reference Manual | ||
| Text | INSTALL |
Details
| biocViews | MassSpectrometry, Software |
| Version | 1.24.1 |
| In Bioconductor since | BioC 2.2 (R-2.7) |
| License | GPL-2 |
| Depends | R (>= 2.0.0), RcppClassic |
| Imports | |
| Suggests | RUnit |
| System Requirements | None |
| URL | http://msbi.ipb-halle.de/ |
| Depends On Me | |
| Imports Me | |
| Suggests Me | MSnbase, RforProteomics |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | Rdisop_1.24.1.tar.gz |
| Windows Binary | Rdisop_1.24.1.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | Rdisop_1.24.1.tgz |
| Mac OS X 10.9 (Mavericks) | Rdisop_1.24.1.tgz |
| Browse/checkout source | (username/password: readonly) |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Counting Reads for Differential Expression (parathyroideSE vignette)
- Annotation
- Annotating Variants
- Annotating Ranges
- Flow Cytometry and other assays
- Candidate Binding Sites for Known Transcription Factors
- Cloud-enabled cis-eQTL search and annotation
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