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Segmentation of Bis-seq data

Bioconductor version: 2.14

This is a package for the discovery of regulatory regions from Bis-seq data

Author: Lukas Burger, Dimos Gaidatzis, Dirk Schubeler and Michael Stadler

Maintainer: Lukas Burger <Lukas.Burger at>

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PDF R Script MethylSeekR
PDF   Reference Manual


biocViews DNAMethylation, MethylSeq, Sequencing, Software
Version 1.4.0
In Bioconductor since BioC 2.12 (R-3.0)
License GPL (>=2)
Depends rtracklayer(>= 1.16.3), parallel (>= 2.15.1), mhsmm (>= 0.4.4)
Imports IRanges(>= 1.16.3), BSgenome(>= 1.26.1), GenomicRanges(>= 1.10.5), geneplotter(>= 1.34.0), graphics (>= 2.15.2), grDevices (>= 2.15.2), parallel (>= 2.15.2), stats (>= 2.15.2), utils (>= 2.15.2)
Suggests BSgenome.Hsapiens.UCSC.hg18
System Requirements
Depends On Me
Imports Me
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