biosvd-package | Package for high-throughput data processing, outlier detection, noise removal and dynamic modeling |
apply | The Eigensystem class |
assaycorrelations | The Eigensystem class |
assayMatrix | The Eigensystem class |
biosvd | Package for high-throughput data processing, outlier detection, noise removal and dynamic modeling |
colorIdFeatures | The Eigensystem class |
compute | Compute the eigensystem for a feature by assay matrix |
compute-method | Compute the eigensystem for a feature by assay matrix |
eigenassays | The Eigensystem class |
eigenexpressions | The Eigensystem class |
eigenfeatures | The Eigensystem class |
Eigensystem | The Eigensystem class |
Eigensystem-class | The Eigensystem class |
entropy | The Eigensystem class |
exclude | Excludes specified eigenfeatures/eigenassays from the data |
exclude-method | Excludes specified eigenfeatures/eigenassays from the data |
excludeEigenfeatures | The Eigensystem class |
featurecorrelations | The Eigensystem class |
featureMatrix | The Eigensystem class |
fractions | The Eigensystem class |
HeLaData | Human HeLa Cell Cycle Expression |
matrix | The Eigensystem class |
plot | Generate visualizations of the eigensystem |
plot-method | Generate visualizations of the eigensystem |
report | Generates a summarizing report of the eigensystem |
report-method | Generates a summarizing report of the eigensystem |
show-method | The Eigensystem class |
signMatrix | The Eigensystem class |
sort | Sorts the data according to two eigenfeatures and eigenassays |
sort-method | Sorts the data according to two eigenfeatures and eigenassays |
StarvationData | Human HeLa Cell Cycle Expression |
YeastData | Yeast Cell Cycle Expression |