Bioconductor facilities for parallel evaluation


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Documentation for package ‘BiocParallel’ version 0.6.1

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BiocParallel-package Bioconductor facilities for parallel evaluation
BatchJobsParam Enable parallelization on batch systems
BatchJobsParam-class Enable parallelization on batch systems
BiocParallel Bioconductor facilities for parallel evaluation
BiocParallelParam Virtual classes (for developer reference)
BiocParallelParam-class Virtual classes (for developer reference)
bpaggregate Apply a function on subsets of data frames
bpaggregate-method Apply a function on subsets of data frames
bparallelize-method Enable multi-core parallel evaluation
bpbackend Control (start, stop, query) back-end Params
bpbackend-method Enable parallelization on batch systems
bpbackend-method Enable parallel evaluation using registered dopar backend
bpbackend-method Enable simple network of workstations (SNOW)-style parallel evaluation
bpbackend-method Control (start, stop, query) back-end Params
bpbackend<- Control (start, stop, query) back-end Params
bpbackend<-,BatchJobsParam Enable parallelization on batch systems
bpbackend<--method Enable parallel evaluation using registered dopar backend
bpbackend<--method Enable simple network of workstations (SNOW)-style parallel evaluation
bpbackend<--method Control (start, stop, query) back-end Params
bpcontrols Control (start, stop, query) back-end Params
bpisup Control (start, stop, query) back-end Params
bpisup-method Enable parallelization on batch systems
bpisup-method Enable parallel evaluation using registered dopar backend
bpisup-method Enable multi-core parallel evaluation
bpisup-method Enable serial evaluation
bpisup-method Enable simple network of workstations (SNOW)-style parallel evaluation
bpisup-method Control (start, stop, query) back-end Params
bplapply Parallel lapply-like functionality
bplapply-method Parallel lapply-like functionality
bplasterror Resume computation with partial results
bpmapply Parallel mapply-like functionality
bpmapply-method Parallel mapply-like functionality
bpparam Maintain a global registry of available back-end Params
bpresume Resume computation with partial results
bpschedule Schedule back-end Params
bpschedule-method Enable parallelization on batch systems
bpschedule-method Enable multi-core parallel evaluation
bpschedule-method Schedule back-end Params
bpstart Control (start, stop, query) back-end Params
bpstart-method Enable parallelization on batch systems
bpstart-method Enable parallel evaluation using registered dopar backend
bpstart-method Enable simple network of workstations (SNOW)-style parallel evaluation
bpstart-method Control (start, stop, query) back-end Params
bpstop Control (start, stop, query) back-end Params
bpstop-method Enable parallelization on batch systems
bpstop-method Enable parallel evaluation using registered dopar backend
bpstop-method Enable simple network of workstations (SNOW)-style parallel evaluation
bpstop-method Control (start, stop, query) back-end Params
bpvec Parallel, vectorized evaluation
bpvec-method Enable multi-core parallel evaluation
bpvec-method Parallel, vectorized evaluation
bpvectorize Transform vectorized functions into parallelized, vectorized function
bpvectorize-method Transform vectorized functions into parallelized, vectorized function
bpworkers Control (start, stop, query) back-end Params
bpworkers-method Virtual classes (for developer reference)
bpworkers-method Enable parallelization on batch systems
bpworkers-method Enable parallel evaluation using registered dopar backend
bpworkers-method Enable serial evaluation
bpworkers-method Enable simple network of workstations (SNOW)-style parallel evaluation
bpworkers-method Control (start, stop, query) back-end Params
coerce-method Enable parallel evaluation using registered dopar backend
coerce-method Enable simple network of workstations (SNOW)-style parallel evaluation
DoparParam Enable parallel evaluation using registered dopar backend
DoparParam-class Enable parallel evaluation using registered dopar backend
MulticoreParam Enable multi-core parallel evaluation
MulticoreParam-class Enable multi-core parallel evaluation
multicoreWorkers Enable multi-core parallel evaluation
register Maintain a global registry of available back-end Params
registered Maintain a global registry of available back-end Params
SerialParam Enable serial evaluation
SerialParam-class Enable serial evaluation
show-method Virtual classes (for developer reference)
show-method Enable parallelization on batch systems
show-method Enable parallel evaluation using registered dopar backend
show-method Enable multi-core parallel evaluation
show-method Enable simple network of workstations (SNOW)-style parallel evaluation
SnowParam Enable simple network of workstations (SNOW)-style parallel evaluation
SnowParam-class Enable simple network of workstations (SNOW)-style parallel evaluation