source("http://bioconductor.org/biocLite.R")
biocLite("prebsdata")

prebsdata

Data for 'prebs' package

Bioconductor version: 2.13

This package contains data required to run examples in 'prebs' package. The data files include: 1) Small sample bam files for demonstration purposes 2) Probe sequence mappings for Custom CDF (taken from http://brainarray.mbni.med.umich.edu/brainarray/Database/CustomCDF/genomic_curated_CDF.asp) 3) Probe sequence mappings for manufacturer's CDF (manually created using bowtie)

Author: Karolis Uziela and Antti Honkela

Maintainer: Karolis Uziela <karolis.uziela at scilifelab.se>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("prebsdata")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prebsdata")

 

PDF	R Script	prebsdata User Guide
PDF		Reference Manual

Details

biocViews	ExperimentData, RNAseqData
Version	0.99.5
License	Artistic-2.0
Depends	R (>= 2.14.0)
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	prebs, SigFuge

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	prebsdata_0.99.5.tar.gz
Windows Binary	prebsdata_0.99.5.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	prebsdata_0.99.5.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats