source("http://bioconductor.org/biocLite.R")
biocLite("mosaicsExample")

mosaicsExample

Example data for the mosaics package, which implements MOSAiCS, a statistical framework to analyze one-sample or two-sample ChIP-seq data

Bioconductor version: 2.13

Data for the mosaics package, consisting of chromosome 21 ChIP and control sample data from a ChIP-seq experiment of STAT1 binding, with mappability, GC content, and sequence ambiguity scores of human genome HG18.

Author: Dongjun Chung, Pei Fen Kuan, Sunduz Keles

Maintainer: Dongjun Chung <chungdon at stat.wisc.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("mosaicsExample")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mosaicsExample")

 

PDF		Reference Manual

Details

biocViews	ChIPseqData, ExperimentData, Homo_sapiens
Version	0.99.9
License	GPL (>= 2)
Depends	R (>= 2.11.1)
Imports
Suggests
System Requirements
URL	http://groups.google.com/group/mosaics_user_group
Depends On Me
Imports Me
Suggests Me	mosaics

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	mosaicsExample_0.99.9.tar.gz
Windows Binary	mosaicsExample_0.99.9.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	mosaicsExample_0.99.9.tgz
Browse/checkout source	(username/password: readonly)
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