source("http://bioconductor.org/biocLite.R")
biocLite("lumiBarnes")

lumiBarnes

Barnes Benchmark Illumina Tissues Titration Data

Bioconductor version: 2.13

The Barnes benchmark dataset can be used to evaluate the algorithms for Illumina microarrays. It measured a titration series of two human tissues, blood and placenta, and includes six samples with the titration ratio of blood and placenta as 100:0, 95:5, 75:25, 50:50, 25:75 and 0:100. The samples were hybridized on HumanRef-8 BeadChip (Illumina, Inc) in duplicate. The data is loaded as an LumiBatch Object (see documents in the lumi package).

Author: Pan Du

Maintainer: Pan Du <dupan at northwestern.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("lumiBarnes")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("lumiBarnes")

 

PDF		Reference Manual

Details

biocViews	ExperimentData, NormalTissue, OneChannel, RNAExpressionData
Version	1.3.11
License	LGPL
Depends	R (>= 2.0), Biobase(>= 2.5.5), lumi(>= 1.1.0)
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	arrayMvout, lumi

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	lumiBarnes_1.3.11.tar.gz
Windows Binary	lumiBarnes_1.3.11.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	lumiBarnes_1.3.11.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats