source("http://bioconductor.org/biocLite.R")
biocLite("leeBamViews")

leeBamViews

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Bioconductor version: 2.13

data from PMID 19096707; prototype for managing multiple NGS samples

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("leeBamViews")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("leeBamViews")

 

PDF	R Script	managing multiple NGS samples with bamViews
PDF		Reference Manual

Details

biocViews	CellBiology, DifferentialExpression, ExperimentData, Genetics, HighThroughputSequencing, RNAseq, RNAseqData
Version	0.99.24
License	Artistic 2.0
Depends	R (>= 2.15.0), Biobase, Rsamtools(>= 0.1.50), BSgenome
Imports	GenomicRanges, methods
Suggests	GenomeGraphs, biomaRt, org.Sc.sgd.db, edgeR
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	EDASeq

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	leeBamViews_0.99.24.tar.gz
Windows Binary	leeBamViews_0.99.24.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	leeBamViews_0.99.24.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats